Results 41 - 60 of 202 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 28600 | 0.66 | 0.973383 |
Target: 5'- uGGGA-GACGGCCGCGcgccuGGCC-CGAc- -3' miRNA: 3'- -UCCUgCUGCUGGCGUu----UUGGcGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 126123 | 0.66 | 0.973383 |
Target: 5'- gGGGACGGCGACCugGCGGA--CG-GAUGg -3' miRNA: 3'- -UCCUGCUGCUGG--CGUUUugGCgCUAU- -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 59667 | 0.66 | 0.973383 |
Target: 5'- gGGGGCGAcuCGGCuCGCGuggGGGCgGCGGg- -3' miRNA: 3'- -UCCUGCU--GCUG-GCGU---UUUGgCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 97212 | 0.66 | 0.973383 |
Target: 5'- cAGGA-GACcGCCGCGGuGGCCGUGGa- -3' miRNA: 3'- -UCCUgCUGcUGGCGUU-UUGGCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 97656 | 0.66 | 0.973383 |
Target: 5'- cGGGAgcgcCGGCGGCUGUAcgcGGACCGCc--- -3' miRNA: 3'- -UCCU----GCUGCUGGCGU---UUUGGCGcuau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 45351 | 0.66 | 0.96751 |
Target: 5'- gAGGACGugGCGAUCGCGGAGCgGg---- -3' miRNA: 3'- -UCCUGC--UGCUGGCGUUUUGgCgcuau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 43446 | 0.66 | 0.96751 |
Target: 5'- uGGugGACGAgucugcgaccCCGCAGua-CGCGGg- -3' miRNA: 3'- uCCugCUGCU----------GGCGUUuugGCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 49787 | 0.66 | 0.960773 |
Target: 5'- gAGGccCGGCGACUGCGGGAgcuaaaccacauUCGCGAg- -3' miRNA: 3'- -UCCu-GCUGCUGGCGUUUU------------GGCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 8792 | 0.66 | 0.960773 |
Target: 5'- cGGGACGGgcgaGGCCGCGGggUaaaGCGGc- -3' miRNA: 3'- -UCCUGCUg---CUGGCGUUuuGg--CGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 24364 | 0.66 | 0.960773 |
Target: 5'- cGGcGACGACGcCCGCGGGaagcccGCCGCc--- -3' miRNA: 3'- -UC-CUGCUGCuGGCGUUU------UGGCGcuau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 36876 | 0.66 | 0.963574 |
Target: 5'- uGGACuACGACCgaccacacgacauGCAggcuucuGAGCCGCGAa- -3' miRNA: 3'- uCCUGcUGCUGG-------------CGU-------UUUGGCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 38959 | 0.66 | 0.964252 |
Target: 5'- cAGcACGGCGGCCGCcGuuCCGaUGAUAg -3' miRNA: 3'- -UCcUGCUGCUGGCGuUuuGGC-GCUAU- -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 43873 | 0.66 | 0.964252 |
Target: 5'- cGGAaacccaGCGGCCGCGGccCCGCGGg- -3' miRNA: 3'- uCCUgc----UGCUGGCGUUuuGGCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 11400 | 0.66 | 0.964252 |
Target: 5'- cGGGCcAUGGCCGCcucguuGACCGCGc-- -3' miRNA: 3'- uCCUGcUGCUGGCGuu----UUGGCGCuau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 58929 | 0.66 | 0.964252 |
Target: 5'- cAGGGCcACGGCCGCucccCCGcCGAc- -3' miRNA: 3'- -UCCUGcUGCUGGCGuuuuGGC-GCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 108873 | 0.66 | 0.964252 |
Target: 5'- cGGGuGCGACG-CCGCGcucgugcGCgCGCGAUAc -3' miRNA: 3'- -UCC-UGCUGCuGGCGUuu-----UG-GCGCUAU- -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 68106 | 0.66 | 0.964252 |
Target: 5'- cGGACGcACGggGCCGCGcacggccaAGACgGCGAg- -3' miRNA: 3'- uCCUGC-UGC--UGGCGU--------UUUGgCGCUau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 24903 | 0.66 | 0.96751 |
Target: 5'- uGGGccCGGCGcuGCCGCGGAGcCCGCGc-- -3' miRNA: 3'- -UCCu-GCUGC--UGGCGUUUU-GGCGCuau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 71 | 0.66 | 0.96751 |
Target: 5'- cGGGCGGCGGCgGCGggcGGGCgGCa--- -3' miRNA: 3'- uCCUGCUGCUGgCGU---UUUGgCGcuau -5' |
|||||||
5126 | 3' | -53.4 | NC_001798.1 | + | 4850 | 0.66 | 0.96751 |
Target: 5'- cGGGGCGACGGuCCGgGuucgggguGGGCgGCGGUc -3' miRNA: 3'- -UCCUGCUGCU-GGCgU--------UUUGgCGCUAu -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home