miRNA display CGI

Results 61 - 68 of 68 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
5540	5'	-53.5	NC_001806.1	+	7595	0.72	0.697168
	Target:  5'- ---cCGCCCACcggaaGCCCAACCCACa--- -3' miRNA:   3'- aauuGUGGGUG-----UGGGUUGGGUGacac -5'
5540	5'	-53.5	NC_001806.1	+	23384	0.72	0.697168
	Target:  5'- -gGACGCCCGCGCCCcccucCCCGCg--- -3' miRNA:   3'- aaUUGUGGGUGUGGGuu---GGGUGacac -5'
5540	5'	-53.5	NC_001806.1	+	89748	0.73	0.665756
	Target:  5'- aUAGCGgCCACGCCC-ACCgGCUGaUGa -3' miRNA:   3'- aAUUGUgGGUGUGGGuUGGgUGAC-AC- -5'
5540	5'	-53.5	NC_001806.1	+	23443	0.73	0.665756
	Target:  5'- ---cCGCCCcCGCCCAGCCCGCg--- -3' miRNA:   3'- aauuGUGGGuGUGGGUUGGGUGacac -5'
5540	5'	-53.5	NC_001806.1	+	113974	0.73	0.634083
	Target:  5'- -cAACACCCAgGCCCGAgCCGCg--- -3' miRNA:   3'- aaUUGUGGGUgUGGGUUgGGUGacac -5'
5540	5'	-53.5	NC_001806.1	+	125573	0.74	0.612944
	Target:  5'- -gGGCACCCACGCCCGcgACCCGg---- -3' miRNA:   3'- aaUUGUGGGUGUGGGU--UGGGUgacac -5'
5540	5'	-53.5	NC_001806.1	+	49007	0.75	0.529615
	Target:  5'- -cGGCACCUAC-CCCGGCCUccauccgcGCUGUGg -3' miRNA:   3'- aaUUGUGGGUGuGGGUUGGG--------UGACAC- -5'
5540	5'	-53.5	NC_001806.1	+	146114	1.07	0.005678
	Target:  5'- cUUAACACCCACACCCAACCCACUGUGg -3' miRNA:   3'- -AAUUGUGGGUGUGGGUUGGGUGACAC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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