Results 41 - 48 of 48 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 144020 | 0.66 | 0.986115 |
|
Target: 5'- cCCAacGGAaagcggCGggGugUUGGGGGAg -3' miRNA: 3'- -GGU--UCUguaag-GCuuCugAGCCCCCU- -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 56664 | 0.66 | 0.986115 |
|
Target: 5'- cCCGugGGAUcgUUgGggGG-UCGGGGGGg -3' miRNA: 3'- -GGU--UCUGuaAGgCuuCUgAGCCCCCU- -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 15952 | 0.66 | 0.986115 |
|
Target: 5'- --cGGAUcc-CCGGccaGGACUCGGGGGc -3' miRNA: 3'- gguUCUGuaaGGCU---UCUGAGCCCCCu -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 13568 | 0.66 | 0.987711 |
|
Target: 5'- uCCAAcacGGCGUaguaaaccgugaUCgGGAGGCUgGGGGGc -3' miRNA: 3'- -GGUU---CUGUA------------AGgCUUCUGAgCCCCCu -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 67521 | 0.66 | 0.987711 |
|
Target: 5'- cCCugGGCcgUCgCGgcGAgagaUCGGGGGGc -3' miRNA: 3'- -GGuuCUGuaAG-GCuuCUg---AGCCCCCU- -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 103238 | 0.66 | 0.987711 |
|
Target: 5'- uCCAAaa-GUcCCGggGgaACUCGGGGGu -3' miRNA: 3'- -GGUUcugUAaGGCuuC--UGAGCCCCCu -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 20892 | 0.66 | 0.988882 |
|
Target: 5'- gCCGGGACg--CCGAuacgcGGACgaagcgcgggaGGGGGAu -3' miRNA: 3'- -GGUUCUGuaaGGCU-----UCUGag---------CCCCCU- -5' |
|||||||
| 5545 | 5' | -52.4 | NC_001806.1 | + | 147763 | 0.66 | 0.989161 |
|
Target: 5'- cCCGAcGCgg-CCGcGGACgCGGGGGGc -3' miRNA: 3'- -GGUUcUGuaaGGCuUCUGaGCCCCCU- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home