Results 21 - 40 of 117 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 227905 | 0.66 | 0.984246 |
Target: 5'- cGGGGAAaauGGAgaaGGCGAUGGaaGACAGc -3' miRNA: 3'- uCCCCUU---CCUg--CUGCUACUagCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 169338 | 0.66 | 0.985973 |
Target: 5'- uGGGGGccGGACGugGGagggGAcUGGCAu -3' miRNA: 3'- -UCCCCuuCCUGCugCUa---CUaGCUGUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 79058 | 0.66 | 0.984246 |
Target: 5'- cGGGGAAGcGCGGCGcgGucgucaCGGCGAc -3' miRNA: 3'- uCCCCUUCcUGCUGCuaCua----GCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 109252 | 0.66 | 0.985973 |
Target: 5'- -cGGGAagAGGugGACGuuucucggacagGUGAUCGugAu -3' miRNA: 3'- ucCCCU--UCCugCUGC------------UACUAGCugUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 189896 | 0.66 | 0.987552 |
Target: 5'- cGGcGGcGAGGACGGCGgcGAggaCGGCGg -3' miRNA: 3'- uCC-CC-UUCCUGCUGCuaCUa--GCUGUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 223275 | 0.66 | 0.988573 |
Target: 5'- gGGGGGcGGGACGccgcgcgcagcuacAUGGUGccgccgGUCGACAc -3' miRNA: 3'- -UCCCCuUCCUGC--------------UGCUAC------UAGCUGUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 75551 | 0.66 | 0.98899 |
Target: 5'- uGGcGGAGGACGACGAcgcgGA-CGACu- -3' miRNA: 3'- uCCcCUUCCUGCUGCUa---CUaGCUGuu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 123915 | 0.66 | 0.98899 |
Target: 5'- gAGcGGGAAGGugGACGGcgggcUGGcCGuCAGa -3' miRNA: 3'- -UC-CCCUUCCugCUGCU-----ACUaGCuGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 121793 | 0.66 | 0.987552 |
Target: 5'- cGGGGAcgccgaaGACGACGAcGA-CGACGAc -3' miRNA: 3'- uCCCCUuc-----CUGCUGCUaCUaGCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 20894 | 0.66 | 0.985973 |
Target: 5'- cGGGGGAAGaGGCG-CGAgGAcaggCGAUAAc -3' miRNA: 3'- -UCCCCUUC-CUGCuGCUaCUa---GCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 114216 | 0.67 | 0.978091 |
Target: 5'- gAGGcGGAA-GAUGGCGGUGAugugguccucaUCGACGg -3' miRNA: 3'- -UCC-CCUUcCUGCUGCUACU-----------AGCUGUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 164589 | 0.67 | 0.978091 |
Target: 5'- cGGGGAGGacgcGGCGGCGAUGcUCagGGCGu -3' miRNA: 3'- uCCCCUUC----CUGCUGCUACuAG--CUGUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 109800 | 0.67 | 0.967337 |
Target: 5'- cAGGGGGAGGGCGAacagGAUCa---- -3' miRNA: 3'- -UCCCCUUCCUGCUgcuaCUAGcuguu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 81926 | 0.67 | 0.967337 |
Target: 5'- gAGGGGGAcGACGACGgcGAg-GGCGGa -3' miRNA: 3'- -UCCCCUUcCUGCUGCuaCUagCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 59365 | 0.67 | 0.967337 |
Target: 5'- cGGGGAAGaGaACGugGcgGAgaugcgCGACAu -3' miRNA: 3'- uCCCCUUC-C-UGCugCuaCUa-----GCUGUu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 4227 | 0.67 | 0.970319 |
Target: 5'- cGGGGAgcGGGACGuCGAgcccCGACGGg -3' miRNA: 3'- uCCCCU--UCCUGCuGCUacuaGCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 108373 | 0.67 | 0.970319 |
Target: 5'- uGGGGGAucGGGAgGGCGggGggCGAg-- -3' miRNA: 3'- -UCCCCU--UCCUgCUGCuaCuaGCUguu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 227829 | 0.67 | 0.970319 |
Target: 5'- -cGGGAagGGGACGugGA-GA-CGACGAc -3' miRNA: 3'- ucCCCU--UCCUGCugCUaCUaGCUGUU- -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 228949 | 0.67 | 0.975689 |
Target: 5'- gAGGGGggGaGACGGCGGaGAggaaCGAa-- -3' miRNA: 3'- -UCCCCuuC-CUGCUGCUaCUa---GCUguu -5' |
|||||||
9154 | 3' | -53.6 | NC_002512.2 | + | 131630 | 0.67 | 0.978091 |
Target: 5'- cGGGGGcAAGGACGggaaguACGggGuccgCGACGAg -3' miRNA: 3'- -UCCCC-UUCCUGC------UGCuaCua--GCUGUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home