Results 21 - 40 of 83 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
9588 | 3' | -53 | NC_002577.1 | + | 100553 | 0.66 | 0.979836 |
Target: 5'- uGgUCUCGuc-CaUCAUCCGGAGCaGCCc -3' miRNA: 3'- -CgGGAGCuuuGcAGUAGGCCUUG-CGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 138219 | 0.66 | 0.985462 |
Target: 5'- cCUCUUGGucGAgGUCAUCCGGcgguggcGGCGCa -3' miRNA: 3'- cGGGAGCU--UUgCAGUAGGCC-------UUGCGg -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 61871 | 0.67 | 0.972459 |
Target: 5'- cGCUCUCGuacauuuuGCGUC-UCCGaGcAACGUCa -3' miRNA: 3'- -CGGGAGCuu------UGCAGuAGGC-C-UUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 11264 | 0.67 | 0.969614 |
Target: 5'- gGCCCggucauaaGAAGCGgaggCG-CCGGAucuccgcuuagaGCGCCg -3' miRNA: 3'- -CGGGag------CUUUGCa---GUaGGCCU------------UGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 108167 | 0.67 | 0.972459 |
Target: 5'- uGUCCUCGcacGCGUCGggggcUCCGuGGCGCa -3' miRNA: 3'- -CGGGAGCuu-UGCAGU-----AGGCcUUGCGg -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 161108 | 0.67 | 0.972459 |
Target: 5'- -aCCUCGGuuuuGCGggCGUCCuGGAacaccugcaACGCCu -3' miRNA: 3'- cgGGAGCUu---UGCa-GUAGG-CCU---------UGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 4622 | 0.67 | 0.966566 |
Target: 5'- cGUCC-CGuc-CGaCGUuuGGAACGCCg -3' miRNA: 3'- -CGGGaGCuuuGCaGUAggCCUUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 122032 | 0.67 | 0.977563 |
Target: 5'- cGCgUUCGccgcGGCGUCcgAUCCGGGAuCGCUc -3' miRNA: 3'- -CGgGAGCu---UUGCAG--UAGGCCUU-GCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 110617 | 0.67 | 0.977563 |
Target: 5'- cUCCaUCGugGCuUCuauagcuUCCGGAGCGCCu -3' miRNA: 3'- cGGG-AGCuuUGcAGu------AGGCCUUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 82639 | 0.67 | 0.977563 |
Target: 5'- gGCCCUCGAcGCcggCGUUCGauuGAugcACGCCu -3' miRNA: 3'- -CGGGAGCUuUGca-GUAGGC---CU---UGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 136904 | 0.67 | 0.975106 |
Target: 5'- cCCCU-GAAGCGUg--CCGcGACGCCg -3' miRNA: 3'- cGGGAgCUUUGCAguaGGCcUUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 12080 | 0.67 | 0.972459 |
Target: 5'- uGCgCCUCGuccGCGUCcgcgcCCGGGucguCGCCc -3' miRNA: 3'- -CG-GGAGCuu-UGCAGua---GGCCUu---GCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 122350 | 0.67 | 0.969614 |
Target: 5'- gGCCCggucauaaGAAGCGgaggCG-CCGGAucuccgcuuagaGCGCCg -3' miRNA: 3'- -CGGGag------CUUUGCa---GUaGGCCU------------UGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 128992 | 0.67 | 0.966566 |
Target: 5'- cGUCC-CGuc-CGaCGUuuGGAACGCCg -3' miRNA: 3'- -CGGGaGCuuuGCaGUAggCCUUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 136230 | 0.67 | 0.972459 |
Target: 5'- -aCCUCGGuuuuGCGggCGUCCuGGAacaccugcaACGCCu -3' miRNA: 3'- cgGGAGCUu---UGCa-GUAGG-CCU---------UGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 160434 | 0.67 | 0.975106 |
Target: 5'- cCCCU-GAAGCGUg--CCGcGACGCCg -3' miRNA: 3'- cGGGAgCUUUGCAguaGGCcUUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 138585 | 0.68 | 0.963307 |
Target: 5'- cGCCCucuucaUCGGAACaGUCGUCUGc--CGCCc -3' miRNA: 3'- -CGGG------AGCUUUG-CAGUAGGCcuuGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 104690 | 0.68 | 0.948076 |
Target: 5'- cGCCUgcgUGAcgauccgcGGCGUCGUCCGcGcacGCGCCc -3' miRNA: 3'- -CGGGa--GCU--------UUGCAGUAGGC-Cu--UGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 137167 | 0.68 | 0.952223 |
Target: 5'- cGCCgaCGcgGCcUCuUCCGGAACGUCc -3' miRNA: 3'- -CGGgaGCuuUGcAGuAGGCCUUGCGG- -5' |
|||||||
9588 | 3' | -53 | NC_002577.1 | + | 160521 | 0.68 | 0.952223 |
Target: 5'- gGUUCUCGAcGGCGUUGUCC---GCGCCg -3' miRNA: 3'- -CGGGAGCU-UUGCAGUAGGccuUGCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home