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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 16215 | - | 203425 | 89 | 19 | -22.6 | YP_214144 | 5' arm 3' arm | ||
| 16222 | - | 211764 | 88 | 20.5 | -24.9 | YP_214153 | 5' arm 3' arm | ||
| 16226 | - | 218444 | 90 | 22.5 | -21.5 | YP_214159 | 5' arm 3' arm | ||
| 16235 | - | 229828 | 90 | 21.5 | -19.6 | YP_214170 | 5' arm 3' arm | ||
| 16202 | - | 197195 | 87 | 21 | -20.5 | YP_214140 | 5' arm 3' arm | ||
| 16207 | - | 198913 | 85 | 20.5 | -27 | YP_214141 | 5' arm 3' arm | ||
| 16218 | - | 207866 | 88 | 22 | -20.8 | YP_214149 | 5' arm 3' arm | ||
| 16236 | - | 230023 | 89 | 21.5 | -29.6 | YP_214170 | 5' arm 3' arm | ||
| 16210 | - | 200455 | 87 | 21.5 | -26.3 | YP_214142 | 5' arm 3' arm | ||
| 16233 | - | 229144 | 88 | 22 | -21.6 | 5' arm 3' arm | |||
| 16220 | - | 208104 | 89 | 21.5 | -25.9 | YP_214150 | 5' arm 3' arm | ||
| 16212 | - | 201912 | 82 | 24 | -21 | YP_214143 | 5' arm 3' arm | ||
| 16221 | - | 209865 | 90 | 22.5 | -25.6 | YP_214151 | 5' arm 3' arm | ||
| 16224 | - | 212785 | 90 | 22.5 | -21.2 | YP_214153 | 5' arm 3' arm | ||
| 16227 | - | 221524 | 90 | 20.5 | -24.7 | YP_214162 | 5' arm 3' arm | ||
| 16234 | - | 229527 | 89 | 20 | -19.9 | YP_214170 | 5' arm 3' arm | ||
| 16198 | - | 193997 | 86 | 19 | -28.1 | 5' arm 3' arm | |||
| 16199 | - | 195131 | 90 | 20.5 | -24.3 | YP_214139 | 5' arm 3' arm | ||
| 16213 | - | 202616 | 87 | 19.5 | -28.3 | YP_214143 | 5' arm 3' arm | ||
| 16206 | - | 198738 | 87 | 20.5 | -23.1 | YP_214141 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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