miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29615	-	96252	86	22	-22			5' arm      3' arm
29617	-	97103	89	19	-19.4	YP_068377		5' arm      3' arm
29645	-	130225	88	22.5	-21.4			5' arm      3' arm
29641	-	126148	86	22.5	-26.24	YP_068391		5' arm      3' arm
29639	-	121810	86	21	-26.8	YP_068387		5' arm      3' arm
29632	-	119132	90	20.5	-26.4	YP_068385		5' arm      3' arm
29630	-	115807	90	22.5	-23.13			5' arm      3' arm
29628	-	111075	90	19.5	-20			5' arm      3' arm
29624	-	105766	88	20	-27.3	YP_068381		5' arm      3' arm
29621	-	101120	89	21.5	-28.8			5' arm      3' arm
29573	-	63133	85	19	-26.2			5' arm      3' arm
29577	-	65595	89	19.5	-24	YP_068354		5' arm      3' arm
29607	-	91545	86	22.5	-20.4	YP_068371		5' arm      3' arm
29602	-	85063	89	21	-31.9	YP_068368		5' arm      3' arm
29600	-	82609	80	21	-32.8	YP_068366		5' arm      3' arm
29594	-	79450	89	22.5	-26	YP_068363		5' arm      3' arm
29583	-	67658	87	25	-24.1	YP_068356		5' arm      3' arm
29588	-	69342	89	22.5	-21.9	YP_068356		5' arm      3' arm
29585	-	68041	86	20	-24.1	YP_068356		5' arm      3' arm
29586	-	68466	87	19	-27.8	YP_068356		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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