miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1212	-	161178	87	22.5	-23.5			5' arm      3' arm
1211	-	159609	90	20	-23.9	NP_051879		5' arm      3' arm
1210	-	158287	90	22.5	-28.2	NP_051715		5' arm      3' arm
1209	-	157720	87	20	-24.2	NP_051876		5' arm      3' arm
1208	-	156791	89	20	-19.4	NP_051874		5' arm      3' arm
1207	-	154819	87	20.5	-21.2	NP_051873		5' arm      3' arm
1206	-	151279	87	23	-28.1	NP_051870		5' arm      3' arm
1205	-	150540	73	21	-25.1	NP_051722		5' arm      3' arm
1204	-	148441	89	21.5	-21.4	NP_051865		5' arm      3' arm
1203	-	145501	90	25	-20.8	NP_051863		3' arm
1202	-	135416	90	22.5	-23.2			5' arm      3' arm
1201	-	134716	90	22.5	-27.09	NP_051852		5' arm      3' arm
1200	-	134248	89	20.5	-19.6	NP_051852		3' arm
1199	-	127948	87	20	-23.6	NP_051848		5' arm
1198	-	127664	90	21.5	-30.6	NP_051848		5' arm      3' arm
1197	-	119760	90	20.5	-23	NP_051840		5' arm      3' arm
1196	-	112242	89	21.5	-20.91	NP_051828		5' arm      3' arm
1195	-	104559	89	22.5	-20.6			5' arm      3' arm
1194	-	89894	90	20	-24	NP_051805		5' arm      3' arm
1193	-	12991	90	20	-22.2	NP_051723		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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