miRNA display CGI


Results 1 - 20 of 61 are showing below:
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GenBank Identifier RefSeq Acc. Name
18450236 NC_001132.2 Myxoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
1198 - 127664 90 21.5 -30.6 NP_051848 5' arm      3' arm
1163 + 45928 90 20 -29.9 NP_051758 5' arm      3' arm
1154 + 3487 90 22.5 -28.2 NP_051877 5' arm      3' arm
1210 - 158287 90 22.5 -28.2 NP_051715 5' arm      3' arm
1206 - 151279 87 23 -28.1 NP_051870 5' arm      3' arm
1158 + 10495 87 23 -28.1 NP_051870 5' arm      3' arm
1167 + 136265 89 24 -27.6 NP_051854 5' arm      3' arm
1201 - 134716 90 22.5 -27.09 NP_051852 5' arm      3' arm
1190 - 10708 90 20 -25.2 NP_051722 5' arm      3' arm
1173 + 151066 90 20 -25.2 NP_051870 5' arm      3' arm
1205 - 150540 73 21 -25.1 NP_051722 5' arm      3' arm
1159 + 11234 73 21 -25.1 NP_051870 5' arm      3' arm
1180 + 159232 83 21.5 -24.9 NP_051879 5' arm      3' arm
1183 - 2542 83 21.5 -24.9 NP_051713 5' arm      3' arm
1171 + 150201 90 24 -24.79 NP_051869 5' arm      3' arm
1192 - 11573 90 24 -24.79 NP_051869 5' arm      3' arm
1184 - 3055 90 19.5 -24.5 NP_051714 5' arm      3' arm
1179 + 158719 90 19.5 -24.5 NP_051878 5' arm      3' arm
1155 + 4054 87 20 -24.2 NP_051876 5' arm      3' arm
1209 - 157720 87 20 -24.2 NP_051876 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.