miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5142	+	27296	89	19.5	-23.7	NP_044482		5' arm      3' arm
5143	+	28355	83	19	-21.6	NP_044483		5' arm      3' arm
5144	+	28784	90	19.5	-21.9	NP_044483		5' arm      3' arm
5145	+	29042	87	21	-21.5	NP_044484		5' arm      3' arm
5146	+	29829	86	19.5	-21.1	NP_044484		5' arm      3' arm
5147	+	30530	88	20	-27.5	NP_044485		5' arm      3' arm
5148	+	32923	90	19	-25.9	NP_044486		5' arm      3' arm
5149	+	33410	79	20.5	-21	NP_044486		5' arm      3' arm
5150	+	33510	85	22	-26.7			5' arm      3' arm
5151	+	33903	87	19	-21.3	NP_044484		5' arm      3' arm
5152	+	34054	88	19.5	-22.9	NP_044484		5' arm      3' arm
5153	+	34837	88	21.5	-20.6			5' arm      3' arm
5154	+	35461	89	19	-19.5	NP_044487		5' arm      3' arm
5155	+	36214	88	20.5	-19.8			5' arm      3' arm
5156	+	36956	90	19	-21.8	NP_044488		5' arm      3' arm
5157	+	38600	89	21	-22.1	NP_044488		5' arm      3' arm
5158	+	39208	89	19	-22.59	NP_044488		5' arm      3' arm
5159	+	39484	87	20	-19.8	NP_044488		5' arm      3' arm
5160	+	39647	89	19.5	-21.4	NP_044488		5' arm      3' arm
5161	+	40228	90	20.5	-21.8	NP_044488		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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