miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
5162	+	41202	89	19.5	-19.6	NP_044489		5' arm      3' arm
5163	+	42590	85	22.5	-22.6	NP_044490		5' arm      3' arm
5164	+	43311	90	22	-23.8	NP_044490		5' arm      3' arm
5165	+	43702	87	21	-20.2	NP_044490		5' arm      3' arm
5166	+	44198	89	21	-21.9	NP_044491		5' arm      3' arm
5167	+	44646	90	20.5	-28.5	NP_044491		5' arm      3' arm
5168	+	44736	90	20	-22.4	NP_044491		5' arm      3' arm
5169	+	45459	89	19	-27.5	NP_044491		5' arm      3' arm
5170	+	45598	89	20.5	-22.1	NP_044491		5' arm      3' arm
5171	+	46333	89	22.5	-27.8	NP_044491		5' arm      3' arm
5172	+	47393	90	19.5	-20.64	NP_044492		5' arm      3' arm
5173	+	47625	90	19.5	-19.5	NP_044492		5' arm      3' arm
5174	+	48633	90	20	-21.6	NP_044493		5' arm      3' arm
5175	+	48859	90	19.5	-21.26			5' arm      3' arm
5176	+	49399	90	20	-21.7	NP_044494		5' arm      3' arm
5177	+	49630	88	20.5	-21.1	NP_044494		5' arm      3' arm
5178	+	49939	90	22.5	-23.7	NP_044494		5' arm      3' arm
5179	+	50099	90	19.5	-20.6	NP_044494		5' arm      3' arm
5180	+	50244	90	20	-21.5	NP_044494		5' arm      3' arm
5181	+	50900	90	19.5	-23.6			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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