miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6589	-	60134	90	19.5	-20.1	NP_045332		5' arm      3' arm
6685	-	127130	89	23.5	-20.12			5' arm      3' arm
6488	+	111088	89	23.5	-20.12			5' arm      3' arm
6419	+	56774	88	20	-20.3	NP_045331		5' arm      3' arm
6650	-	97459	90	20.5	-20.3	NP_045357		5' arm      3' arm
6347	+	2744	89	23	-20.4	NP_045304		5' arm      3' arm
6613	-	79752	90	23	-20.4	NP_045342		5' arm      3' arm
6401	+	46331	90	22	-20.5	NP_045328		5' arm      3' arm
6355	+	10647	87	19	-20.6	NP_045311		5' arm      3' arm
6668	-	112435	90	24	-20.6			5' arm      3' arm
6585	-	56728	90	21.5	-20.6	NP_045331		5' arm      3' arm
6504	+	125783	90	24	-20.6			5' arm      3' arm
6574	-	50718	87	20	-20.7	NP_045329		5' arm      3' arm
6535	-	15342	89	19	-20.7	NP_045313		5' arm      3' arm
6681	-	121307	90	19	-20.7	NP_045371		5' arm      3' arm
6414	+	54307	86	21.5	-20.8	NP_045330		5' arm      3' arm
6646	-	96260	90	21	-20.8	NP_045354		5' arm      3' arm
6497	+	120466	88	20	-20.9	NP_045371		5' arm      3' arm
6657	-	102724	89	21	-20.9	NP_045363		5' arm      3' arm
6644	-	95991	89	20	-21	NP_045354		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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