miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22408	+	10616	90	24	-22.4	NP_878215		5' arm      3' arm
22406	+	9591	89	23	-25.3	NP_878213		5' arm      3' arm
22434	-	9590	90	19	-23.8	NP_878213		5' arm      3' arm
22407	+	9692	88	21	-25.6	NP_878213		5' arm      3' arm
22435	-	9959	89	21.5	-22.2	NP_878213		5' arm      3' arm
22433	-	9098	89	23.5	-22.8	NP_878212		5' arm      3' arm
22405	+	9266	88	21.5	-28.1	NP_878212		5' arm      3' arm
22432	-	8351	88	19	-26.3	NP_878209		5' arm      3' arm
22404	+	7726	86	26.5	-26.3	NP_878208		5' arm      3' arm
22403	+	7340	90	21	-20.8	NP_878207		5' arm      3' arm
22402	+	6876	89	23	-23.4	NP_878206		5' arm      3' arm
22401	+	6771	89	22	-22.6	NP_878206		5' arm      3' arm
22400	+	6321	88	21	-28.2	NP_878204		5' arm      3' arm
22399	+	5674	89	19	-22.2	NP_878203		5' arm      3' arm
22428	-	5296	90	19	-25.31	NP_878203		5' arm      3' arm
22397	+	5348	88	22	-23.9	NP_878203		5' arm      3' arm
22398	+	5530	86	19	-20.3	NP_878203		5' arm      3' arm
22430	-	5895	87	20	-22.6	NP_878203		5' arm      3' arm
22429	-	5645	88	22.5	-23.9	NP_878203		5' arm      3' arm
22427	-	3966	89	22	-21.8	NP_878201		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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