miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6209	+	66616	88	19	-20.5	NP_045252		5' arm      3' arm
6274	-	56521	89	20.5	-20.5	NP_045248		5' arm      3' arm
6243	+	134108	81	19	-20.8	NP_045291		5' arm      3' arm
6263	-	19765	90	27	-21.1	NP_045231		5' arm      3' arm
6250	+	142067	86	21	-21.2	NP_045296		5' arm      3' arm
6202	+	26222	88	20	-21.2	NP_045236		5' arm      3' arm
6290	-	115983	86	21	-21.2	NP_045296		5' arm      3' arm
6261	-	13558	86	22	-21.3	NP_045229		5' arm      3' arm
6257	-	1094	87	19.5	-21.3	NP_045218		5' arm      3' arm
6208	+	58618	89	21.5	-21.3	NP_045248		5' arm      3' arm
6301	-	129576	89	20	-21.4	NP_045288		5' arm      3' arm
6219	+	78650	86	24.5	-21.5	NP_045260		5' arm      3' arm
6259	-	12594	83	21	-21.6	NP_045228		5' arm      3' arm
6198	+	2407	86	21	-21.7			5' arm      3' arm
6288	-	112620	89	23.5	-21.7			5' arm      3' arm
6252	+	145430	89	23.5	-21.7			5' arm      3' arm
6205	+	41732	85	21	-21.74	NP_045241		5' arm      3' arm
6234	+	116470	87	23	-21.9	NP_045281		5' arm      3' arm
6310	-	141580	87	23	-21.9	NP_045296		5' arm      3' arm
6281	-	87957	89	19	-21.96	NP_045262		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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