miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29473	+	89935	90	19.5	-25.2	YP_068371		5' arm      3' arm
29417	+	36346	89	19.5	-27.61	YP_068339		5' arm      3' arm
29425	+	45123	90	19.5	-22.4			5' arm      3' arm
29421	+	41645	86	19.5	-23.5	YP_068339		5' arm      3' arm
29577	-	65595	89	19.5	-24	YP_068354		5' arm      3' arm
29510	+	125657	90	19.5	-22.2			5' arm      3' arm
29477	+	93050	90	19.5	-21.7	YP_068373		5' arm      3' arm
29408	+	28919	87	19.5	-25.3	YP_068334		5' arm      3' arm
29513	+	133527	90	19.5	-20			5' arm      3' arm
29576	-	64916	89	19.5	-25.3	YP_068354		5' arm      3' arm
29597	-	81270	90	19.5	-23.1	YP_068365		5' arm      3' arm
29501	+	114658	86	19.5	-19.9			5' arm      3' arm
29378	+	6936	87	19.5	-34.5	YP_068322		5' arm      3' arm
29472	+	89181	83	19.5	-28.1	YP_068370		5' arm      3' arm
29374	+	6054	90	19.5	-20	YP_068322		5' arm      3' arm
29388	+	18239	86	19.5	-23	YP_068330		5' arm      3' arm
29373	+	5557	89	19.5	-23	YP_068322		5' arm      3' arm
29628	-	111075	90	19.5	-20			5' arm      3' arm
29522	-	325	89	19.5	-21.2			5' arm      3' arm
29407	+	28644	90	19.5	-23.4	YP_068333		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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