miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30254	-	235068	88	22	-34.6			5' arm      3' arm
30253	-	234820	89	20.5	-21.21			5' arm      3' arm
30252	-	234513	90	21	-20.2	YP_081619		5' arm      3' arm
30251	-	234142	87	21	-25.1	YP_081619		5' arm      3' arm
30250	-	232640	90	21.5	-22.4	YP_081619		5' arm      3' arm
30249	-	230634	90	20.5	-22.1			5' arm      3' arm
30248	-	230155	89	19.5	-22.4	YP_081616		5' arm      3' arm
30247	-	229182	90	21	-21.9	YP_081615		5' arm      3' arm
30246	-	228509	89	20.5	-22.5	YP_081614		5' arm      3' arm
30245	-	227971	90	20.5	-19.4	YP_081614		5' arm      3' arm
30244	-	227718	90	20.5	-28.1	YP_081613		5' arm      3' arm
30243	-	227287	89	21.5	-20.4	YP_081613		5' arm      3' arm
30242	-	226780	82	19.5	-28.5	YP_081613	#hcmv-mir-US33	5' arm
30241	-	226400	89	20	-20	YP_081612		5' arm      3' arm
30240	-	225441	89	21.5	-27.6			5' arm      3' arm
30239	-	223584	89	20	-26.9	YP_081610		5' arm      3' arm
30238	-	223142	86	22	-20.9	YP_081610		5' arm      3' arm
30237	-	221578	88	21.5	-27.2			5' arm      3' arm
30236	-	221159	82	19	-25.2	YP_081609		5' arm      3' arm
30235	-	220558	89	21.5	-24	YP_081609		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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