miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1578	+	42587	89	19	-23.5	NP_039966		5' arm      3' arm
1588	+	49320	90	19	-19.7	NP_039970		5' arm      3' arm
1624	+	89158	89	19	-23.9	NP_039991		5' arm      3' arm
1617	+	86582	88	19	-22.5	NP_039990		5' arm      3' arm
1583	+	46376	90	19	-20.4	NP_039969		5' arm      3' arm
1606	+	72313	86	19	-22.3	NP_039983		5' arm      3' arm
1623	+	88795	88	19	-22.7	NP_039991		5' arm      3' arm
1658	+	112113	90	19	-20.7	NP_040011		5' arm      3' arm
1697	+	132740	90	19	-19.7	NP_040023		5' arm      3' arm
1554	+	32508	87	19	-19.9	NP_039960		5' arm      3' arm
1547	+	21626	89	19	-21.2	NP_783773		5' arm      3' arm
1625	+	89702	90	19	-20.3	NP_039991		5' arm      3' arm
1706	+	137865	90	19	-22.6	NP_040029		5' arm      3' arm
1704	+	136334	87	19	-21.4	NP_040028		5' arm      3' arm
1555	+	32807	82	19	-33.6	NP_039961		5' arm      3' arm
1636	+	97410	90	19	-23			5' arm      3' arm
1540	+	7227	89	19	-21.9			5' arm      3' arm
1562	+	36283	88	19	-25	NP_039963		5' arm      3' arm
1603	+	71853	88	19	-21.7	NP_039983		5' arm      3' arm
1597	+	60192	88	19	-28.5	NP_039979		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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