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| GenBank Identifier | RefSeq Acc. | Name |
| 82503188 | NC_007605.1 | Human herpesvirus 4 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 33625 | - | 170009 | 88 | 19 | -24 | 5' arm 3' arm | |||
| 33345 | + | 101110 | 90 | 19 | -21.8 | YP_401681 | 5' arm 3' arm | ||
| 33324 | + | 68208 | 81 | 19 | -24.4 | YP_401657 | 5' arm 3' arm | ||
| 33574 | - | 120097 | 90 | 19 | -21.3 | YP_401695 | 5' arm 3' arm | ||
| 33268 | + | 4647 | 85 | 19 | -22.3 | YP_401633 | 5' arm 3' arm | ||
| 33614 | - | 160724 | 85 | 19 | -25.5 | YP_401715 | 5' arm 3' arm | ||
| 33573 | - | 117680 | 86 | 19 | -22.4 | YP_401690 | 5' arm 3' arm | ||
| 33607 | - | 150608 | 68 | 19 | -23.5 | YP_401709 | 5' arm 3' arm | ||
| 33628 | - | 170547 | 88 | 19 | -24 | 5' arm 3' arm | |||
| 33592 | - | 136898 | 85 | 19 | -23.5 | YP_401705 | 5' arm 3' arm | ||
| 33590 | - | 135986 | 90 | 19 | -25 | YP_401704 | 5' arm 3' arm | ||
| 33419 | + | 164061 | 87 | 19 | -20.6 | YP_401717 | 5' arm 3' arm | ||
| 33550 | - | 101813 | 89 | 19 | -21.32 | YP_401681 | 5' arm 3' arm | ||
| 33322 | + | 67111 | 84 | 19 | -22.5 | YP_401656 | 5' arm 3' arm | ||
| 33417 | + | 163626 | 85 | 19 | -20.8 | YP_401717 | 5' arm 3' arm | ||
| 33397 | + | 153396 | 89 | 19 | -24.39 | YP_401712 | 5' arm 3' arm | ||
| 33583 | - | 128100 | 90 | 19 | -22.8 | YP_401699 | 5' arm 3' arm | ||
| 33611 | - | 156187 | 88 | 19 | -30 | YP_401712 | 5' arm 3' arm | ||
| 33374 | + | 139780 | 90 | 19 | -22.5 | ebv-mir-BART16 | 5' arm | ||
| 33621 | - | 163397 | 87 | 19 | -21.1 | YP_401717 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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