miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31379	-	126361	88	19	-29.5	YP_182401		5' arm      3' arm
31333	+	121511	87	19	-21.64			5' arm      3' arm
31391	-	139594	89	19	-21.4	YP_182398		5' arm      3' arm
31378	-	123887	85	19	-26.3	YP_182399		5' arm      3' arm
31341	+	137838	85	19	-26.3	YP_182409		5' arm      3' arm
31359	-	12089	85	19	-26.2			5' arm      3' arm
31360	-	17045	90	19	-21.7	YP_182338		5' arm      3' arm
31380	-	129160	89	19	-21	YP_182403		5' arm      3' arm
31316	+	25437	90	19	-22.2	YP_182346		5' arm      3' arm
31393	-	140214	87	19	-21.64			5' arm      3' arm
31337	+	126887	90	19	-28.9	YP_182402		5' arm      3' arm
31335	+	122131	89	19	-21.4	YP_182410		5' arm      3' arm
31355	-	2117	90	19	-21			5' arm      3' arm
31370	-	115239	88	19.5	-20.3	YP_182397		5' arm      3' arm
31346	+	146100	89	19.5	-30.4	YP_182411		5' arm      3' arm
31321	+	66196	82	19.5	-20.7	YP_182367		5' arm      3' arm
31373	-	115625	89	19.5	-30.4	YP_182397		5' arm      3' arm
31364	-	101606	89	19.5	-19.5	YP_182389		5' arm      3' arm
31347	+	146210	90	19.5	-28.6	YP_182397		5' arm      3' arm
31381	-	130081	90	19.5	-29.6	YP_182404		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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