miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31324	+	111359	88	20.5	-26.5	YP_182396		5' arm      3' arm
31364	-	101606	89	19.5	-19.5	YP_182389		5' arm      3' arm
31322	+	68204	85	20.5	-28.4	YP_182368		5' arm      3' arm
31321	+	66196	82	19.5	-20.7	YP_182367		5' arm      3' arm
31320	+	65806	90	21	-23.39	YP_182366		5' arm      3' arm
31319	+	55975	90	20	-19.8	YP_182365		5' arm      3' arm
31317	+	26890	90	22	-22.7	YP_182347		5' arm      3' arm
31316	+	25437	90	19	-22.2	YP_182346		5' arm      3' arm
31314	+	24208	89	22.5	-26.3	YP_182345		5' arm      3' arm
31363	-	24110	80	20.5	-20.2	YP_182345		5' arm      3' arm
31361	-	19848	90	23.5	-23.6	YP_182342		5' arm      3' arm
31362	-	20063	88	20.5	-24.7	YP_182342		5' arm      3' arm
31360	-	17045	90	19	-21.7	YP_182338		5' arm      3' arm
31394	-	140786	86	20.5	-21.3			5' arm      3' arm
31355	-	2117	90	19	-21			5' arm      3' arm
31399	-	147304	86	22	-24.8			5' arm      3' arm
31312	+	8789	88	21.5	-20.9			5' arm      3' arm
31327	+	114421	86	22	-24.8			5' arm      3' arm
31325	+	112774	90	20.5	-27.1			5' arm      3' arm
31328	+	115032	86	25.5	-28.5			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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