miRNA display CGI


Results 1 - 20 of 239 are showing below:
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GenBank Identifier RefSeq Acc. Name
49237297 NC_005946.1 Frog virus 3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28572 - 105672 84 24 -20.1 YP_031677 5' arm      3' arm
28570 - 104489 89 19.5 -22.4 YP_031676 5' arm      3' arm
28450 + 104413 82 19.5 -22.4 YP_031676 5' arm      3' arm
28567 - 102422 90 20 -19.4 YP_031674 5' arm      3' arm
28448 + 102157 89 21.5 -19.5 YP_031674 5' arm      3' arm
28568 - 102570 85 20.5 -20.9 YP_031674 5' arm      3' arm
28563 - 101846 83 21 -21.6 YP_031674 5' arm      3' arm
28566 - 102327 90 19.5 -20.8 YP_031674 5' arm      3' arm
28565 - 102217 89 19 -23.4 YP_031674 5' arm      3' arm
28564 - 102088 89 21 -30.8 YP_031674 5' arm      3' arm
28446 + 98997 89 23.5 -20.6 YP_031670 5' arm      3' arm
28447 + 99751 83 19.5 -25.3 YP_031670 5' arm      3' arm
28561 - 99397 87 19 -22.5 YP_031670 5' arm      3' arm
28562 - 99944 89 21.5 -22.6 YP_031670 5' arm      3' arm
28560 - 99203 89 20.5 -29.8 YP_031670 5' arm      3' arm
28559 - 98492 90 21 -19.7 YP_031669 5' arm      3' arm
28557 - 97999 88 23.5 -22.1 YP_031669 5' arm      3' arm
28558 - 98110 90 22.5 -28.8 YP_031669 5' arm      3' arm
28556 - 97796 90 28.5 -25.1 YP_031669 5' arm      3' arm
28442 + 93847 90 19 -20.3 YP_031666 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.