miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28354	+	13903	90	20	-26.1	YP_031587		5' arm      3' arm
28337	+	3222	90	23	-24.8			5' arm      3' arm
28334	+	2055	90	21	-32	YP_031580		5' arm      3' arm
28340	+	4258	89	21	-19.9	YP_031581		5' arm      3' arm
28335	+	2401	90	20	-22.5	YP_031580		5' arm      3' arm
28336	+	2726	87	20	-31.3			5' arm      3' arm
28339	+	4110	85	19	-25.9	YP_031581		5' arm      3' arm
28346	+	9385	87	23.5	-22.9	YP_031586		5' arm      3' arm
28342	+	8497	88	21.5	-20.1	YP_031586		5' arm      3' arm
28345	+	9187	90	21.5	-32.5	YP_031586		5' arm      3' arm
28344	+	9093	88	19.5	-24.3	YP_031586		5' arm      3' arm
28341	+	7987	90	19	-26.8	YP_031586		5' arm      3' arm
28343	+	8996	79	19	-26.5	YP_031586		5' arm      3' arm
28353	+	13791	90	22.5	-27.8	YP_031587		5' arm      3' arm
28351	+	13301	90	22	-33.6	YP_031587		5' arm      3' arm
28347	+	11903	90	21	-24	YP_031587		5' arm      3' arm
28348	+	12203	89	21	-25.8	YP_031587		5' arm      3' arm
28352	+	13681	89	21	-25.4	YP_031587		5' arm      3' arm
28349	+	12350	87	20.5	-24.5	YP_031587		5' arm      3' arm
28350	+	13138	90	19	-19.71	YP_031587		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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