miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
160	+	5987	88	23	-25.5	AP_000166		5' arm      3' arm
162	+	6597	86	22.5	-28.2	AP_000166		5' arm      3' arm
165	+	8658	90	21.5	-19.8	AP_000167		5' arm      3' arm
163	+	7591	85	20.5	-23.5	AP_000166		5' arm      3' arm
161	+	6445	87	20	-20.2	AP_000166		5' arm      3' arm
164	+	8334	90	20	-28.2	AP_000166		5' arm      3' arm
206	-	26284	89	22.5	-26.2	AP_000179		5' arm      3' arm
207	-	26441	89	20.5	-26.6	AP_000179		5' arm      3' arm
205	-	25306	89	20.5	-24.1	AP_000178		5' arm      3' arm
202	-	23559	88	20.5	-22	AP_000177		5' arm      3' arm
204	-	24722	90	20	-32.7	AP_000178		5' arm      3' arm
201	-	23121	88	19.5	-21.7	AP_000177		5' arm      3' arm
203	-	24138	89	25.5	-24.8			5' arm      3' arm
210	-	27515	90	19.5	-20.2	AP_000181		5' arm      3' arm
208	-	26624	90	24	-25	AP_000180		5' arm      3' arm
209	-	26806	90	24.5	-24.3	AP_000180		5' arm      3' arm
213	-	34565	89	19.5	-28.5	AP_000194		5' arm      3' arm
214	-	35294	84	20	-20.1	AP_000196		5' arm      3' arm
211	-	33712	87	22	-19.8	AP_000192		5' arm      3' arm
179	-	2179	87	21	-30.6	AP_000162		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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