miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26301	+	36955	90	23	-30.8	NP_958289		5' arm      3' arm
26331	-	852	87	23	-32.9	YP_115515		5' arm      3' arm
26414	-	39249	90	22.5	-22.2	NP_958290		5' arm      3' arm
26294	+	29039	88	22.5	-21.3	NP_958280		5' arm      3' arm
26400	-	33270	87	22.5	-26.8			5' arm      3' arm
26348	-	9102	89	22.5	-23.9	NP_958254		5' arm      3' arm
26402	-	34365	90	22.5	-19.4	NP_958289		5' arm      3' arm
26359	-	16149	90	22.5	-23.5	NP_958265		5' arm      3' arm
26428	-	45702	90	22.5	-21	NP_958297		5' arm      3' arm
26352	-	11590	89	22.5	-26.2	NP_958257		5' arm      3' arm
26368	-	20365	87	22.5	-25.8	NP_958270		5' arm      3' arm
26362	-	17357	90	22.5	-22.6	NP_958266		5' arm      3' arm
26256	+	1860	89	22.5	-19.5			5' arm      3' arm
26346	-	7832	79	22.5	-28.7	NP_958252		5' arm      3' arm
26336	-	3331	86	22.5	-28.6			5' arm      3' arm
26257	+	2056	89	22	-23.8	NP_958243		5' arm      3' arm
26432	-	49011	88	22	-35.9	NP_958302		5' arm      3' arm
26406	-	36585	89	22	-24.6	NP_958289		5' arm      3' arm
26371	-	21530	86	22	-20.6			5' arm      3' arm
26325	+	46833	87	22	-21.9	NP_958298		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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