miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23103	-	11815	84	19.5	-22.9	NP_938228		5' arm      3' arm
23124	-	19432	89	21.5	-25.2			5' arm      3' arm
23121	-	18036	90	22.5	-29	NP_938235		5' arm      3' arm
23117	-	16908	90	21	-30	NP_938234		5' arm      3' arm
23111	-	15515	87	21	-23.1	NP_938234		5' arm      3' arm
23133	-	21242	90	22.5	-19.9	NP_938241		5' arm      3' arm
23127	-	19884	89	20.5	-27.1			5' arm      3' arm
23126	-	19750	90	19.5	-28.9			5' arm      3' arm
23119	-	17473	88	24	-26.8	NP_938235		5' arm      3' arm
23139	-	23189	85	20	-22.4	NP_938245		5' arm      3' arm
23130	-	20776	86	22.5	-37.2	NP_938240		5' arm      3' arm
23129	-	20208	87	22	-22.3	NP_938240		5' arm      3' arm
23110	-	14418	88	20	-20.8	NP_938233		5' arm      3' arm
23099	-	10012	89	21.5	-20.9	NP_938225		5' arm      3' arm
23086	-	5821	90	21.5	-22.5	NP_938215		5' arm      3' arm
23074	-	2399	90	19.5	-20.6	NP_938212		5' arm      3' arm
23097	-	9078	90	21.5	-22.5	NP_938222		5' arm      3' arm
23108	-	14209	88	19.5	-27.6	NP_938233		5' arm      3' arm
23096	-	8943	87	23	-24.9	NP_938222		5' arm      3' arm
23093	-	7566	88	22.5	-24	NP_938219		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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