miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2382	-	16499	90	21	-21.1	NP_040600		5' arm      3' arm
2380	-	14967	85	19.5	-20.3	NP_040599		5' arm      3' arm
2379	-	14845	88	19	-29.8	NP_040598		5' arm      3' arm
2376	-	10923	89	20	-29.7	NP_040595		5' arm      3' arm
2377	-	11419	88	19.5	-28.1	NP_040595		5' arm      3' arm
2375	-	10369	88	19	-20.1	NP_040594		5' arm      3' arm
2369	-	3652	88	22.5	-28.6	NP_040583		5' arm      3' arm
2374	-	6477	89	21	-22.7	NP_040587		5' arm      3' arm
2372	-	5468	89	21	-22.3	NP_040584		5' arm      3' arm
2366	-	1404	77	19.5	-24.3	NP_040581		5' arm      3' arm
2381	-	16090	77	21.5	-20.7	NP_040600		5' arm      3' arm
2384	-	17039	88	19	-25.7	NP_040600		5' arm      3' arm
2383	-	16758	90	19.5	-21.1	NP_040600		5' arm      3' arm
2385	-	18391	87	24	-28.7	NP_040600		5' arm      3' arm
2386	-	27605	89	21.5	-24.1			5' arm      3' arm
2387	-	37829	89	24.5	-21.2	NP_040628		5' arm      3' arm
2388	-	39110	90	21.5	-27.1	NP_040631		5' arm      3' arm
2389	-	40390	87	21.5	-22.2	NP_040633		5' arm      3' arm
2390	-	43972	87	19	-21.2	NP_040642		5' arm      3' arm
2391	-	44792	86	22.5	-27.2	NP_040643		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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