miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8165	-	8127	90	21	-20.1	NP_047931		5' arm      3' arm
8164	-	7961	88	22.5	-32.5	NP_047930		5' arm      3' arm
8163	-	7475	90	20	-22.5	NP_047930		5' arm      3' arm
8162	-	6969	89	20	-22.2	NP_047929		5' arm      3' arm
8161	-	6776	88	22	-25.7	NP_047929		5' arm      3' arm
8160	-	5988	86	19.5	-20.4	NP_047927		5' arm      3' arm
8159	-	5891	88	19	-25.9	NP_047927		5' arm      3' arm
8158	-	5450	84	22.5	-25.2	NP_047927		5' arm      3' arm
8157	-	5306	89	19.5	-29.8	NP_047927		5' arm      3' arm
8156	-	1928	83	20	-22.1	NP_047924		5' arm      3' arm
8155	-	853	89	24	-28.4	NP_047923		5' arm      3' arm
8154	+	41087	88	20	-19.4	NP_047976		5' arm      3' arm
8153	+	40886	90	20.5	-29.6	NP_047975		5' arm      3' arm
8152	+	40624	89	19.5	-19.9			5' arm      3' arm
8151	+	39243	87	19	-29.6	NP_047974		5' arm      3' arm
8150	+	38848	90	21	-27	NP_047974		5' arm      3' arm
8149	+	38117	90	22	-33.3	NP_047973		5' arm      3' arm
8148	+	37850	89	20	-33.5	NP_047972		5' arm      3' arm
8147	+	36987	89	23	-36.6			5' arm      3' arm
8146	+	36629	90	21	-24.7	NP_047970		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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