miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27476	-	28715	90	22.5	-21.6	YP_009218		5' arm      3' arm
27479	-	31100	90	20	-21.7			5' arm      3' arm
27407	+	2473	87	20	-21.8	YP_009198		5' arm      3' arm
27422	+	9630	90	20	-22	YP_009202		5' arm      3' arm
27408	+	3267	89	20.5	-22.1			5' arm      3' arm
27426	+	12972	89	23	-22.2	YP_009204		5' arm      3' arm
27465	-	25066	89	21	-22.3	YP_009213		5' arm      3' arm
27454	-	16468	88	23	-22.3	YP_009207		5' arm      3' arm
27461	-	23195	86	20.5	-22.5	YP_009212		5' arm      3' arm
27459	-	22797	90	19	-22.5	YP_009212		5' arm      3' arm
27449	-	14180	89	20	-22.5	YP_009205		5' arm      3' arm
27442	-	7133	87	20.5	-22.6	YP_009201		5' arm      3' arm
27444	-	10834	90	19	-22.6	YP_009203		5' arm      3' arm
27447	-	13061	90	22	-22.7	YP_009204		5' arm      3' arm
27455	-	17301	90	22.5	-22.7	YP_009207		5' arm      3' arm
27463	-	24000	89	19.5	-23	YP_009212		5' arm      3' arm
27431	+	22595	88	19.5	-23.2			5' arm      3' arm
27483	-	33037	90	20	-23.3	YP_009223		5' arm      3' arm
27443	-	7621	88	21	-23.8	YP_009201		5' arm      3' arm
27409	+	3513	89	21	-23.8	YP_009199		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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