miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11380	-	63155	90	19.5	-23	NP_203376		5' arm      3' arm
11382	-	64465	87	20.5	-21.8	NP_203377		5' arm      3' arm
11392	-	80113	87	22.5	-23.1	NP_203394		5' arm      3' arm
11399	-	96615	88	20.5	-23.1	NP_203402		5' arm      3' arm
11368	-	37925	87	23.5	-27.1			5' arm      3' arm
11375	-	54032	87	19.5	-23.1	NP_203369		5' arm      3' arm
11385	-	67757	90	19	-21.1	NP_203380		5' arm      3' arm
11402	-	103073	90	19.5	-19.8	NP_203408		5' arm      3' arm
11376	-	55081	88	19.5	-23.7			5' arm      3' arm
11401	-	102806	90	20	-21.4	NP_203408		5' arm      3' arm
11381	-	64040	90	21.5	-20.3	NP_203377		5' arm      3' arm
11378	-	59155	89	24.5	-20.71	NP_203371		5' arm      3' arm
11386	-	68649	89	24.5	-35.6			5' arm      3' arm
11390	-	75333	80	22.5	-25.7	NP_203389		5' arm      3' arm
11393	-	80912	88	23.5	-22	NP_203394		5' arm      3' arm
11398	-	93872	87	19.5	-23.4	NP_203399		5' arm      3' arm
11364	-	13839	90	21	-22.1	NP_203319		5' arm      3' arm
11367	-	32018	87	19	-21.4	NP_203339		5' arm      3' arm
11371	-	49241	81	22	-25.6			5' arm      3' arm
11373	-	49540	89	22	-30			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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