miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21000	-	199	77	28.5	-32.3	NP_835588		5' arm      3' arm
21001	-	1806	88	28	-20.4			5' arm      3' arm
20991	+	40185	89	25	-21.6			5' arm      3' arm
20990	+	39835	90	24.5	-26.9	NP_835631		5' arm      3' arm
20989	+	39022	90	23.5	-24.9	NP_835630		5' arm      3' arm
20987	+	38524	90	23.5	-26.9	NP_835629		5' arm      3' arm
21004	-	13699	85	23.5	-20.1	NP_835602		5' arm      3' arm
21024	-	120618	89	23.5	-22.2	NP_835721		5' arm      3' arm
20996	+	116772	89	23	-19.5	NP_835715		5' arm      3' arm
21009	-	39007	85	23	-29.7	NP_835630		5' arm      3' arm
20988	+	38636	85	22.5	-25.82	NP_835629		5' arm      3' arm
20998	+	125907	89	22.5	-20.4	NP_835728		5' arm      3' arm
21014	-	72470	90	22.5	-23.7			5' arm      3' arm
21011	-	44726	90	22	-22.7	NP_835644		5' arm      3' arm
21012	-	45238	90	22	-22.5	NP_835645		5' arm      3' arm
20986	+	34063	88	21.5	-25.8	NP_835625		5' arm      3' arm
21022	-	92639	89	21.5	-21.7	NP_835691		5' arm      3' arm
20993	+	72598	90	21.5	-21.8	NP_835670		5' arm      3' arm
21016	-	83114	90	21.5	-29.7	NP_835684		5' arm      3' arm
21013	-	48758	90	21.5	-21.2	NP_835648		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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