miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30434	+	14057	86	19	-22.6	YP_164065		5' arm      3' arm
30482	+	34246	89	19	-23.2	YP_164090		5' arm      3' arm
30431	+	13528	86	19	-19.5	YP_164064		5' arm      3' arm
30432	+	13792	88	19	-26.7	YP_164064		5' arm      3' arm
30486	+	35724	86	19	-23.3	YP_164093		5' arm      3' arm
30521	-	17111	89	19	-26.8	YP_164068		5' arm      3' arm
30450	+	21167	88	19	-25.6	YP_164074		5' arm      3' arm
30483	+	34365	89	19	-20.9	YP_164090		5' arm      3' arm
30418	+	5748	87	19	-25.7	YP_164048		5' arm      3' arm
30462	+	25858	88	19	-26.4	YP_164084		5' arm      3' arm
30414	+	4535	90	19	-20.9	YP_164047		5' arm      3' arm
30560	-	29929	87	19	-22.5	YP_164086		5' arm      3' arm
30491	-	593	86	19	-20.3	YP_164038		5' arm      3' arm
30444	+	18124	89	19	-20.7	YP_164069		5' arm      3' arm
30518	-	16586	90	19	-19.9	YP_164068		5' arm      3' arm
30530	-	20849	90	19	-21.4	YP_164073		5' arm      3' arm
30447	+	20045	89	19	-29.7	YP_164072		5' arm      3' arm
30524	-	17976	90	19	-22.4	YP_164069		5' arm      3' arm
30480	+	33771	90	19	-22.4	YP_164090		5' arm      3' arm
30484	+	34703	90	19	-21.3	YP_164092		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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