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GenBank Identifier | RefSeq Acc. | Name |
56692568 | NC_006548.1 | Bacteriophage B3 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30486 | + | 35724 | 86 | 19 | -23.3 | YP_164093 | 5' arm 3' arm | ||
30507 | - | 12185 | 87 | 19 | -33.7 | YP_164061 | 5' arm 3' arm | ||
30484 | + | 34703 | 90 | 19 | -21.3 | YP_164092 | 5' arm 3' arm | ||
30414 | + | 4535 | 90 | 19 | -20.9 | YP_164047 | 5' arm 3' arm | ||
30524 | - | 17976 | 90 | 19 | -22.4 | YP_164069 | 5' arm 3' arm | ||
30482 | + | 34246 | 89 | 19 | -23.2 | YP_164090 | 5' arm 3' arm | ||
30437 | + | 15625 | 90 | 19.5 | -20.5 | YP_164067 | 5' arm 3' arm | ||
30439 | + | 16427 | 89 | 19.5 | -19.6 | YP_164068 | 5' arm 3' arm | ||
30443 | + | 17605 | 88 | 19.5 | -26.7 | YP_164068 | 5' arm 3' arm | ||
30522 | - | 17263 | 90 | 19.5 | -25.7 | YP_164068 | 5' arm 3' arm | ||
30489 | + | 37093 | 89 | 19.5 | -21 | YP_164093 | 5' arm 3' arm | ||
30566 | - | 33668 | 89 | 19.5 | -22.9 | YP_164089 | 5' arm 3' arm | ||
30564 | - | 32797 | 84 | 19.5 | -21.4 | YP_164089 | 5' arm 3' arm | ||
30528 | - | 19919 | 90 | 19.5 | -28 | YP_164072 | 5' arm 3' arm | ||
30458 | + | 23334 | 90 | 19.5 | -22.7 | YP_164077 | 5' arm 3' arm | ||
30576 | - | 38326 | 89 | 19.5 | -21.2 | YP_164095 | 5' arm 3' arm | ||
30412 | + | 4209 | 90 | 19.5 | -22 | YP_164046 | 5' arm 3' arm | ||
30460 | + | 23941 | 90 | 19.5 | -25.7 | YP_164078 | 5' arm 3' arm | ||
30426 | + | 10117 | 90 | 19.5 | -20.8 | YP_164054 | 5' arm 3' arm | ||
30531 | - | 21096 | 89 | 19.5 | -22.1 | YP_164073 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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