miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13177	+	133472	89	25.5	-26			5' arm      3' arm
13236	-	102141	88	24.5	-20.7	NP_570812		5' arm      3' arm
13187	-	12787	88	24.5	-24.9	NP_570749		5' arm      3' arm
13148	+	113487	84	24.5	-32.8	NP_598364		5' arm      3' arm
13255	-	114339	88	24.5	-28.6			5' arm      3' arm
13265	-	118605	88	24.5	-31.7	NP_598366		5' arm      3' arm
13237	-	103285	89	24.5	-21	NP_570812		5' arm      3' arm
13185	-	12382	89	24.5	-21.1	NP_570749		5' arm      3' arm
13184	-	11741	88	24	-28.9	NP_570749		5' arm      3' arm
13173	+	132988	89	24	-27.6			5' arm      3' arm
13147	+	113321	84	24	-24.6			5' arm      3' arm
13092	+	120	89	24	-27.6			5' arm      3' arm
13102	+	14206	86	24	-28	NP_570750		5' arm      3' arm
13240	-	105152	89	24	-22.1	NP_570812		5' arm      3' arm
13146	+	113178	90	24	-24.2			5' arm      3' arm
13121	+	31193	89	23.5	-24.3	NP_570760		5' arm      3' arm
13216	-	44807	90	23.5	-27.14	NP_570767		5' arm      3' arm
13129	+	52483	89	23.5	-24.5	NP_570777		5' arm      3' arm
13211	-	33089	88	23.5	-23.2	NP_570761		5' arm      3' arm
13204	-	20707	87	23.5	-30.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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