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GenBank Identifier | RefSeq Acc. | Name |
56160703 | AC_000013.1 | Fowl adenovirus 9 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
444 | + | 689 | 90 | 20 | -20.6 | AP_000366 | 5' arm 3' arm | ||
445 | + | 903 | 86 | 19.5 | -21.6 | AP_000367 | 5' arm 3' arm | ||
446 | + | 1240 | 89 | 21.5 | -26.6 | AP_000367 | 5' arm 3' arm | ||
447 | + | 1563 | 88 | 23 | -29.2 | AP_000369 | 5' arm 3' arm | ||
448 | + | 2211 | 90 | 20.5 | -24.4 | AP_000371 | 5' arm 3' arm | ||
449 | + | 2408 | 88 | 23.5 | -26.1 | AP_000371 | 5' arm 3' arm | ||
450 | + | 2526 | 89 | 22 | -19.7 | AP_000371 | 5' arm 3' arm | ||
451 | + | 5047 | 89 | 20.5 | -21.1 | AP_000374 | 5' arm 3' arm | ||
452 | + | 5179 | 88 | 20.5 | -23.8 | AP_000374 | 5' arm 3' arm | ||
453 | + | 5374 | 89 | 24.5 | -21.9 | AP_000375 | 5' arm 3' arm | ||
454 | + | 5870 | 89 | 23.5 | -20.6 | AP_000375 | 5' arm 3' arm | ||
455 | + | 6019 | 90 | 20 | -22 | AP_000375 | 5' arm 3' arm | ||
456 | + | 7447 | 90 | 21 | -24.4 | 5' arm 3' arm | |||
457 | + | 8005 | 89 | 22 | -20.6 | 5' arm 3' arm | |||
458 | + | 8318 | 88 | 20 | -25.8 | 5' arm 3' arm | |||
459 | + | 8674 | 87 | 23.5 | -23.4 | 5' arm 3' arm | |||
460 | + | 8851 | 90 | 20.5 | -23.7 | 5' arm 3' arm | |||
461 | + | 10154 | 90 | 22 | -20.2 | 5' arm 3' arm | |||
462 | + | 10632 | 86 | 22 | -20.5 | 5' arm 3' arm | |||
463 | + | 10743 | 90 | 19 | -22.9 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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