miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
367	+	22377	90	22.5	-22.5	AP_000315		5' arm      3' arm
412	-	22693	87	20	-31.2	AP_000315		5' arm      3' arm
411	-	22466	90	19	-22.1	AP_000315		5' arm      3' arm
410	-	22147	90	19	-21.9	AP_000315		5' arm      3' arm
413	-	22953	82	19.5	-22.2	AP_000315		5' arm      3' arm
409	-	21628	87	20.5	-22.8	AP_000314		5' arm      3' arm
366	+	21117	81	19.5	-26.2	AP_000314		5' arm      3' arm
404	-	20188	89	20	-30.9	AP_000313		5' arm      3' arm
403	-	20069	88	19.5	-24.9	AP_000313		5' arm      3' arm
405	-	20526	90	19.5	-20.2	AP_000313		5' arm      3' arm
406	-	20844	88	23	-21.5	AP_000313		5' arm      3' arm
365	+	18461	85	19	-21	AP_000313		5' arm      3' arm
402	-	19930	89	21.5	-20.2	AP_000313		5' arm      3' arm
407	-	20978	90	20	-26.6	AP_000313		5' arm      3' arm
401	-	17990	88	21.5	-25.2	AP_000312		5' arm      3' arm
398	-	16830	89	22	-20.2	AP_000310		5' arm      3' arm
397	-	16550	88	22	-21.8	AP_000310		5' arm      3' arm
399	-	16943	88	19	-20.2	AP_000310		5' arm      3' arm
400	-	17050	90	23	-24	AP_000310		5' arm      3' arm
396	-	15464	90	20	-20.3	AP_000308		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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