miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16956	-	34621	89	20.5	-20.8	NP_700420		5' arm      3' arm
16955	-	34433	90	22.5	-20.3	NP_700419		5' arm      3' arm
16954	-	34192	87	19	-21.2	NP_700419		5' arm      3' arm
16953	-	31171	90	19	-21.8	NP_700415		5' arm      3' arm
16952	-	24659	90	22	-23.4	NP_700406		5' arm      3' arm
16951	-	24281	84	19.5	-23	NP_700405		5' arm      3' arm
16950	-	14277	89	20	-24.5	NP_700391		5' arm      3' arm
16949	-	14073	89	22	-28.8	NP_700391		5' arm      3' arm
16948	-	13578	79	19	-20.2	NP_700391		5' arm      3' arm
16947	-	12829	86	22.5	-21.8	NP_700390		5' arm      3' arm
16946	-	11777	90	22.5	-28	NP_700389		5' arm      3' arm
16945	-	8795	86	20	-19.6	NP_700386		5' arm      3' arm
16944	-	8617	90	20.5	-20.2	NP_700386		5' arm      3' arm
16943	-	7856	81	22	-22.2	NP_700386		5' arm      3' arm
16942	-	6806	89	19.5	-28.3	NP_700383		5' arm      3' arm
16941	-	3042	79	19	-21.9	NP_700377		5' arm      3' arm
16940	-	2555	87	19	-22.6	NP_700377		5' arm      3' arm
16939	-	1066	86	19	-23.8	NP_700375		5' arm      3' arm
16938	+	36955	90	20	-23.6			5' arm      3' arm
16937	+	34713	90	22	-24.5	NP_700420		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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