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GenBank Identifier | RefSeq Acc. | Name |
18071213 | NC_003324.1 | Sinorhizobium meliloti phage PBC5 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
12459 | - | 33922 | 86 | 22 | -25.3 | 5' arm 3' arm | |||
12458 | - | 33786 | 88 | 20 | -25.9 | NP_542298 | 5' arm 3' arm | ||
12457 | - | 32755 | 88 | 19.5 | -24.6 | 5' arm 3' arm | |||
12456 | - | 32545 | 86 | 20.5 | -25.5 | NP_542293 | 5' arm 3' arm | ||
12455 | - | 32182 | 90 | 20 | -27.7 | NP_542296 | 5' arm 3' arm | ||
12454 | - | 31869 | 89 | 20.5 | -28.61 | NP_542293 | 5' arm 3' arm | ||
12453 | - | 31768 | 88 | 19 | -23.8 | NP_542293 | 5' arm 3' arm | ||
12452 | - | 31667 | 90 | 19.5 | -20.1 | NP_542293 | 5' arm 3' arm | ||
12451 | - | 29897 | 89 | 19 | -25.9 | NP_542295 | 5' arm 3' arm | ||
12450 | - | 29781 | 89 | 22.5 | -22 | NP_542295 | 5' arm 3' arm | ||
12449 | - | 29181 | 90 | 23.5 | -29.1 | NP_542293 | 5' arm 3' arm | ||
12448 | - | 28809 | 89 | 19.5 | -25.8 | NP_542294 | 5' arm 3' arm | ||
12447 | - | 28614 | 90 | 20.5 | -20.9 | NP_542293 | 5' arm 3' arm | ||
12446 | - | 26555 | 90 | 21.5 | -27.4 | NP_542293 | 5' arm 3' arm | ||
12445 | - | 24501 | 85 | 20 | -24.2 | NP_542291 | 5' arm 3' arm | ||
12444 | - | 23244 | 88 | 21 | -23.3 | NP_542283 | 5' arm 3' arm | ||
12443 | - | 22044 | 88 | 21.5 | -22.9 | NP_542283 | 5' arm 3' arm | ||
12442 | - | 21598 | 88 | 20.5 | -27.9 | NP_542286 | 5' arm 3' arm | ||
12441 | - | 20583 | 87 | 22 | -20.9 | NP_542283 | 5' arm 3' arm | ||
12440 | - | 19512 | 88 | 19.5 | -24.7 | NP_542283 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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