miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
4349	+	30913	89	19	-19.4	NP_043892		5' arm      3' arm
4385	-	37788	89	19.5	-19.4	NP_043901		5' arm      3' arm
4355	-	7236	86	19	-19.5	NP_043878		5' arm      3' arm
4379	-	28728	87	20.5	-19.5	NP_043891		5' arm      3' arm
4338	+	18038	90	19	-19.6	NP_043885		5' arm      3' arm
4342	+	21485	87	19	-19.7	NP_043887		5' arm      3' arm
4387	-	40313	89	21.5	-19.9	NP_043904		5' arm      3' arm
4319	+	1191	90	23.5	-20.2	NP_043870		5' arm      3' arm
4333	+	11926	90	20.5	-20.3	NP_043879		5' arm      3' arm
4330	+	10168	90	19.5	-20.32			5' arm      3' arm
4340	+	20217	87	20.5	-20.6	NP_043886		5' arm      3' arm
4322	+	2950	87	21	-20.7	NP_043872		5' arm      3' arm
4373	-	26759	89	21.5	-20.7			5' arm      3' arm
4371	-	25205	87	20	-20.8	NP_043889		5' arm      3' arm
4380	-	28837	89	22.5	-20.8	NP_043891		5' arm      3' arm
4357	-	12313	89	21.5	-20.9	NP_043880		5' arm      3' arm
4382	-	30839	90	20.5	-20.9	NP_043892		5' arm      3' arm
4337	+	16211	90	19	-20.91	NP_043882		5' arm      3' arm
4332	+	11472	88	20	-21	NP_043879		5' arm      3' arm
4356	-	9593	89	19.5	-21	NP_043878		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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