miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22309	-	10382	89	19	-20.2	NP_877456		5' arm      3' arm
22373	-	38927	90	19	-24.7	NP_877482		5' arm      3' arm
22242	+	6192	89	19	-27.7	NP_877451		5' arm      3' arm
22246	+	8891	89	19	-25.5	NP_877454		5' arm      3' arm
22252	+	12749	88	19	-23.4	NP_877458		5' arm      3' arm
22271	+	28630	89	19	-27.8	NP_877474		5' arm      3' arm
22301	-	6497	88	19	-29.1			5' arm      3' arm
22308	-	9543	85	19	-23.1	NP_877455		5' arm      3' arm
22343	-	24054	87	19	-23.9	NP_877470		5' arm      3' arm
22364	-	33797	89	19	-27	NP_877476		5' arm      3' arm
22241	+	4347	89	19	-23.5	NP_877448		5' arm      3' arm
22274	+	29816	89	19	-28.4	NP_877475		5' arm      3' arm
22333	-	18717	87	19	-27.5	NP_877465		5' arm      3' arm
22290	+	41581	86	19	-19.8	NP_877486		5' arm      3' arm
22264	+	24552	89	19	-20	NP_877471		5' arm      3' arm
22265	+	25084	87	19	-22	NP_877471		5' arm      3' arm
22326	-	16593	74	19	-25.1	NP_877463		5' arm      3' arm
22339	-	22914	88	19	-32.9	NP_877469		5' arm      3' arm
22237	+	3252	89	19	-21.5	NP_877444		5' arm      3' arm
22275	+	31267	89	19	-20	NP_877475		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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