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| GenBank Identifier | RefSeq Acc. | Name |
| 29566193 | NC_004684.1 | Mycobacteriophage Rosebush virion |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 19099 | + | 58329 | 90 | 21.5 | -29.9 | NP_817829 | 5' arm 3' arm | ||
| 19201 | - | 35434 | 88 | 23 | -29.9 | NP_817797 | 5' arm 3' arm | ||
| 19051 | + | 40614 | 88 | 24 | -29.84 | NP_817806 | 5' arm 3' arm | ||
| 19018 | + | 27015 | 90 | 20.5 | -29.8 | NP_817790 | 5' arm 3' arm | ||
| 19028 | + | 30113 | 89 | 20.5 | -29.6 | NP_817793 | 5' arm 3' arm | ||
| 19205 | - | 36659 | 85 | 20.5 | -29.5 | NP_817799 | 5' arm 3' arm | ||
| 19000 | + | 15037 | 87 | 19 | -29.5 | NP_817777 | 5' arm 3' arm | ||
| 19255 | - | 61289 | 89 | 19 | -29.5 | NP_817837 | 5' arm 3' arm | ||
| 19188 | - | 31828 | 89 | 23.5 | -29.2 | NP_817793 | 5' arm 3' arm | ||
| 19182 | - | 29903 | 88 | 23.5 | -29.2 | NP_817792 | 5' arm 3' arm | ||
| 18981 | + | 4028 | 90 | 21 | -29.2 | NP_817767 | 5' arm 3' arm | ||
| 19256 | - | 61563 | 90 | 22.5 | -29.1 | 5' arm 3' arm | |||
| 19100 | + | 58654 | 82 | 20.5 | -29 | 5' arm 3' arm | |||
| 19103 | + | 59141 | 90 | 21.5 | -28.8 | NP_817831 | 5' arm 3' arm | ||
| 19206 | - | 36891 | 89 | 23 | -28.5 | NP_817799 | 5' arm 3' arm | ||
| 19234 | - | 52415 | 89 | 22 | -28.5 | NP_817817 | 5' arm 3' arm | ||
| 19063 | + | 45836 | 89 | 23.5 | -28.4 | NP_817811 | 5' arm 3' arm | ||
| 19164 | - | 21574 | 89 | 23.5 | -28.3 | NP_817789 | 5' arm 3' arm | ||
| 19024 | + | 28395 | 87 | 20 | -28.3 | NP_817791 | 5' arm 3' arm | ||
| 19228 | - | 47032 | 89 | 22.5 | -28.2 | NP_817813 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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