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| GenBank Identifier | RefSeq Acc. | Name |
| 29566407 | NC_004686.1 | Mycobacteriophage Che9d virion |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 19723 | - | 53092 | 90 | 27 | -21.1 | NP_818072 | 5' arm 3' arm | ||
| 19613 | + | 35528 | 90 | 26 | -28 | NP_818027 | 5' arm 3' arm | ||
| 19694 | - | 38588 | 87 | 26 | -25 | NP_818037 | 5' arm 3' arm | ||
| 19725 | - | 53601 | 89 | 26 | -25.9 | NP_818073 | 5' arm 3' arm | ||
| 19648 | - | 8370 | 88 | 26 | -34.3 | NP_817988 | 5' arm 3' arm | ||
| 19678 | - | 26216 | 86 | 25 | -24.1 | NP_818008 | 5' arm 3' arm | ||
| 19724 | - | 53348 | 89 | 25 | -20.7 | NP_818073 | 5' arm 3' arm | ||
| 19573 | + | 11136 | 90 | 24.5 | -32 | NP_817990 | 5' arm 3' arm | ||
| 19675 | - | 25296 | 88 | 24.5 | -22.4 | NP_818007 | 5' arm 3' arm | ||
| 19592 | + | 21418 | 90 | 24.5 | -24 | NP_817998 | 5' arm 3' arm | ||
| 19654 | - | 11732 | 89 | 24.5 | -19.5 | NP_817990 | 5' arm 3' arm | ||
| 19631 | + | 47606 | 89 | 24.5 | -20.9 | NP_818059 | 5' arm 3' arm | ||
| 19688 | - | 31792 | 89 | 24.5 | -24 | NP_818023 | 5' arm 3' arm | ||
| 19632 | + | 48065 | 85 | 24 | -26.5 | NP_818061 | 5' arm 3' arm | ||
| 19685 | - | 31167 | 90 | 24 | -21.9 | NP_818021 | 5' arm 3' arm | ||
| 19721 | - | 51713 | 86 | 24 | -31.5 | NP_955483 | 5' arm 3' arm | ||
| 19732 | - | 55771 | 88 | 24 | -21.1 | NP_818076 | 5' arm 3' arm | ||
| 19623 | + | 41714 | 89 | 24 | -21.9 | NP_818046 | 5' arm 3' arm | ||
| 19730 | - | 55498 | 90 | 24 | -27.1 | NP_818075 | 5' arm 3' arm | ||
| 19605 | + | 28847 | 86 | 23.5 | -20.3 | NP_818013 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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