miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
20839	-	8874	90	22	-20.2	NP_818554		5' arm
20884	-	41226	82	20	-20.2	NP_818594		5' arm      3' arm
20861	-	17196	90	21	-20.3			5' arm      3' arm
20836	-	4379	89	19	-20.3	NP_818544		5' arm      3' arm
20852	-	14125	89	20.5	-20.3	NP_818561		5' arm      3' arm
20914	-	65347	73	22.5	-20.4	NP_818638		5' arm      3' arm
20816	+	49312	90	20.5	-20.4	NP_818609		5' arm      3' arm
20874	-	36269	90	21.5	-20.4			5' arm      3' arm
20879	-	37581	90	23	-20.4			5' arm      3' arm
20892	-	46444	90	19.5	-20.4	NP_818603		5' arm      3' arm
20903	-	53818	90	19	-20.5	NP_818615		5' arm      3' arm
20820	+	54438	90	19	-20.5	NP_818617		5' arm      3' arm
20882	-	40253	89	20.5	-20.7	NP_818593		5' arm      3' arm
20917	-	68834	90	20	-20.7	NP_818646		5' arm      3' arm
20793	+	31523	88	19.5	-20.7	NP_818577		5' arm      3' arm
20883	-	40869	90	23	-20.8	NP_818594		5' arm      3' arm
20787	+	24586	89	20	-20.8	NP_818572		5' arm      3' arm
20862	-	22384	90	20.5	-20.9	NP_818571		3' arm
20873	-	36065	85	19.5	-21	NP_818584		5' arm      3' arm
20865	-	26472	88	21	-21.1	NP_818573		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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