miRNA display CGI


Results 1 - 20 of 173 are showing below:
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GenBank Identifier RefSeq Acc. Name
57977268 NC_004778.3 Choristoneura fumiferana MNPV

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21273 - 2270 89 19 -25.1 NP_848317 5' arm      3' arm
21194 + 16327 89 22.5 -26.4 NP_848333 5' arm      3' arm
21193 + 14740 90 19 -22.5 NP_848332 5' arm      3' arm
21196 + 21153 90 24.5 -25.5 NP_848340 5' arm      3' arm
21195 + 19689 90 24 -23.4 5' arm      3' arm
21197 + 22376 90 21.5 -25.3 NP_848341 5' arm      3' arm
21198 + 22892 90 20 -23.3 NP_848341 5' arm      3' arm
21199 + 23879 90 23 -22.5 5' arm      3' arm
21200 + 24077 90 23 -22.5 5' arm      3' arm
21192 + 13961 88 22.5 -20.7 NP_848332 5' arm      3' arm
21190 + 10240 87 19 -21.4 NP_848327 5' arm      3' arm
21191 + 12308 89 20 -22.8 NP_848330 5' arm      3' arm
21184 + 2272 90 22 -21.4 NP_848317 5' arm      3' arm
21185 + 4029 87 22 -31.2 NP_848320 5' arm      3' arm
21181 + 977 90 21.5 -24.9 NP_848314 5' arm      3' arm
21182 + 1629 89 21.5 -29.4 NP_848315 5' arm      3' arm
21186 + 6762 88 23 -28.2 NP_848324 5' arm      3' arm
21188 + 8994 90 22 -24.3 NP_848326 5' arm      3' arm
21187 + 7549 90 21 -21.5 NP_848325 5' arm      3' arm
21189 + 9441 90 21.5 -25.4 NP_848326 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.