miRNA display CGI


Results 1 - 20 of 173 are showing below:
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GenBank Identifier RefSeq Acc. Name
57977268 NC_004778.3 Choristoneura fumiferana MNPV

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21235 + 66642 90 28.5 -29 5' arm      3' arm
21269 + 122666 86 26 -23.4 5' arm      3' arm
21333 - 88073 75 23 -22.6 5' arm      3' arm
21270 + 122812 89 30.5 -26.5 5' arm      3' arm
21195 + 19689 90 24 -23.4 5' arm      3' arm
21234 + 66488 88 23.5 -25.7 5' arm      3' arm
21236 + 66744 85 22.5 -19.5 5' arm      3' arm
21199 + 23879 90 23 -22.5 5' arm      3' arm
21200 + 24077 90 23 -22.5 5' arm      3' arm
21351 - 122809 90 20.5 -20.5 5' arm      3' arm
21287 - 24386 85 24 -25.5 5' arm      3' arm
21319 - 66731 90 28.5 -27.7 5' arm      3' arm
21285 - 23989 85 24 -25.5 5' arm      3' arm
21284 - 20036 90 23 -24.7 5' arm      3' arm
21286 - 24187 85 24 -25.5 5' arm      3' arm
21283 - 19776 89 19.5 -21 5' arm      3' arm
21181 + 977 90 21.5 -24.9 NP_848314 5' arm      3' arm
21182 + 1629 89 21.5 -29.4 NP_848315 5' arm      3' arm
21183 + 1893 89 22.5 -27.8 NP_848316 5' arm      3' arm
21273 - 2270 89 19 -25.1 NP_848317 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.