miRNA display CGI


Results 1 - 20 of 173 are showing below:
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GenBank Identifier RefSeq Acc. Name
57977268 NC_004778.3 Choristoneura fumiferana MNPV

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21304 - 35289 88 19 -22.8 NP_848355 5' arm      3' arm
21271 + 127002 89 19 -22.9 NP_848456 5' arm      3' arm
21193 + 14740 90 19 -22.5 NP_848332 5' arm      3' arm
21313 - 47823 90 19 -20.7 NP_848370 5' arm      3' arm
21299 - 33293 88 19 -25.1 NP_848353 5' arm      3' arm
21218 + 45497 89 19 -21 NP_848367 5' arm      3' arm
21255 + 98784 88 19 -25 NP_848426 5' arm      3' arm
21228 + 61402 89 19 -25 NP_848384 5' arm      3' arm
21303 - 34285 88 19 -19.5 NP_848354 5' arm      3' arm
21209 + 34288 89 19 -24 NP_848354 5' arm      3' arm
21190 + 10240 87 19 -21.4 NP_848327 5' arm      3' arm
21273 - 2270 89 19 -25.1 NP_848317 5' arm      3' arm
21211 + 37785 90 19 -19.6 NP_848357 5' arm      3' arm
21214 + 42520 88 19 -24.9 NP_848361 5' arm      3' arm
21335 - 94986 85 19 -22.4 NP_848421 5' arm      3' arm
21222 + 50795 90 19 -19.5 NP_848372 5' arm      3' arm
21350 - 115223 88 19 -20 NP_848445 5' arm      3' arm
21215 + 43132 88 19 -30.3 NP_848363 5' arm      3' arm
21352 - 123651 87 19 -22.1 NP_848453 5' arm      3' arm
21346 - 111978 82 19 -23.6 NP_848441 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.