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GenBank Identifier | RefSeq Acc. | Name |
38638403 | NC_005259.1 | Mycobacteriophage PG1 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
23456 | - | 37119 | 87 | 20.5 | -23.9 | NP_943819 | 5' arm 3' arm | ||
23455 | - | 36898 | 90 | 20.5 | -21.8 | NP_943818 | 5' arm 3' arm | ||
23454 | - | 36656 | 88 | 23.5 | -37.3 | 5' arm 3' arm | |||
23453 | - | 36285 | 88 | 19 | -25.7 | 5' arm 3' arm | |||
23452 | - | 35905 | 88 | 23.5 | -29.2 | NP_943816 | 5' arm 3' arm | ||
23451 | - | 35250 | 85 | 20 | -26.7 | NP_943815 | 5' arm 3' arm | ||
23450 | - | 34791 | 90 | 21 | -22.2 | NP_943814 | 5' arm 3' arm | ||
23449 | - | 34643 | 88 | 20 | -29.6 | NP_943814 | 5' arm 3' arm | ||
23448 | - | 34447 | 90 | 19.5 | -29.2 | NP_943814 | 5' arm 3' arm | ||
23447 | - | 34278 | 88 | 20 | -30.3 | NP_943813 | 5' arm 3' arm | ||
23446 | - | 34105 | 89 | 21 | -25.1 | NP_943813 | 5' arm 3' arm | ||
23445 | - | 33811 | 90 | 22.5 | -27.1 | NP_943812 | 5' arm 3' arm | ||
23444 | - | 33021 | 87 | 22.5 | -23 | NP_943811 | 5' arm 3' arm | ||
23443 | - | 32909 | 90 | 23.5 | -23.01 | NP_943811 | 5' arm 3' arm | ||
23442 | - | 32477 | 84 | 23 | -25.6 | NP_943811 | 5' arm 3' arm | ||
23441 | - | 32099 | 86 | 23 | -25 | NP_943810 | 5' arm 3' arm | ||
23440 | - | 31463 | 88 | 20 | -24.9 | NP_943810 | 5' arm 3' arm | ||
23439 | - | 31345 | 89 | 23 | -23.4 | NP_943810 | 5' arm 3' arm | ||
23438 | - | 31175 | 88 | 19.5 | -20.4 | NP_943810 | 3' arm | ||
23437 | - | 30382 | 89 | 24 | -36.1 | NP_943809 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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