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| GenBank Identifier | RefSeq Acc. | Name |
| 38638403 | NC_005259.1 | Mycobacteriophage PG1 virion |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 23203 | + | 8529 | 90 | 19 | -24.3 | NP_943787 | 5' arm 3' arm | ||
| 23374 | - | 8913 | 90 | 23.5 | -21.7 | NP_943787 | 5' arm 3' arm | ||
| 23371 | - | 7273 | 87 | 22 | -22 | NP_943787 | 5' arm 3' arm | ||
| 23201 | + | 8060 | 88 | 19 | -20.7 | NP_943787 | 5' arm 3' arm | ||
| 23204 | + | 9300 | 88 | 20.5 | -29.8 | NP_943788 | 5' arm 3' arm | ||
| 23376 | - | 9655 | 86 | 21 | -21.6 | NP_943789 | 5' arm 3' arm | ||
| 23207 | + | 11113 | 89 | 19.5 | -19.8 | NP_943790 | 5' arm 3' arm | ||
| 23209 | + | 11369 | 87 | 20.5 | -27.2 | NP_943790 | 5' arm 3' arm | ||
| 23206 | + | 10989 | 84 | 20.5 | -25.7 | NP_943790 | 5' arm 3' arm | ||
| 23205 | + | 10458 | 88 | 20.5 | -24.7 | NP_943790 | 5' arm 3' arm | ||
| 23381 | - | 11491 | 87 | 20 | -21.8 | NP_943790 | 5' arm 3' arm | ||
| 23378 | - | 10779 | 88 | 22 | -22.1 | NP_943790 | 5' arm 3' arm | ||
| 23377 | - | 10624 | 89 | 20 | -20.6 | NP_943790 | 5' arm 3' arm | ||
| 23208 | + | 11274 | 90 | 24.5 | -28.7 | NP_943790 | 5' arm 3' arm | ||
| 23379 | - | 11077 | 89 | 19 | -24.2 | NP_943790 | 5' arm 3' arm | ||
| 23380 | - | 11292 | 86 | 20.5 | -22.9 | NP_943790 | 5' arm 3' arm | ||
| 23212 | + | 12138 | 87 | 22 | -25.7 | NP_943791 | 5' arm 3' arm | ||
| 23210 | + | 11800 | 88 | 21.5 | -21.4 | NP_943791 | 5' arm 3' arm | ||
| 23383 | - | 11926 | 86 | 21 | -24.3 | NP_943791 | 5' arm 3' arm | ||
| 23211 | + | 12000 | 87 | 20 | -25.6 | NP_943791 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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