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GenBank Identifier | RefSeq Acc. | Name |
38638403 | NC_005259.1 | Mycobacteriophage PG1 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
23369 | - | 6097 | 90 | 21 | -28.1 | NP_943786 | 5' arm 3' arm | ||
23310 | + | 53492 | 89 | 23 | -28.1 | NP_943839 | 5' arm 3' arm | ||
23238 | + | 24143 | 90 | 21.5 | -28 | NP_943806 | 5' arm 3' arm | ||
23352 | - | 314 | 90 | 21 | -28 | NP_943779 | 5' arm 3' arm | ||
23427 | - | 28437 | 90 | 21.5 | -27.9 | NP_943808 | 5' arm 3' arm | ||
23240 | + | 25805 | 89 | 25 | -27.9 | NP_943806 | 5' arm 3' arm | ||
23338 | + | 64713 | 88 | 20.5 | -27.8 | NP_943867 | 5' arm 3' arm | ||
23188 | + | 2494 | 88 | 21.5 | -27.7 | NP_943781 | 5' arm 3' arm | ||
23308 | + | 52500 | 88 | 23.5 | -27.6 | NP_943838 | 5' arm 3' arm | ||
23499 | - | 58049 | 89 | 24.5 | -27.5 | NP_943848 | 5' arm 3' arm | ||
23249 | + | 30880 | 89 | 23 | -27.4 | NP_943809 | 5' arm 3' arm | ||
23409 | - | 21789 | 88 | 21 | -27.4 | NP_943806 | 5' arm 3' arm | ||
23416 | - | 24869 | 90 | 23 | -27.4 | NP_943806 | 5' arm 3' arm | ||
23245 | + | 28074 | 90 | 20 | -27.3 | NP_943808 | 5' arm 3' arm | ||
23363 | - | 3708 | 86 | 20.5 | -27.3 | NP_943784 | 5' arm 3' arm | ||
23370 | - | 6353 | 86 | 19 | -27.3 | NP_943786 | 5' arm 3' arm | ||
23493 | - | 56192 | 87 | 19 | -27.2 | 5' arm 3' arm | |||
23209 | + | 11369 | 87 | 20.5 | -27.2 | NP_943790 | 5' arm 3' arm | ||
23399 | - | 17742 | 85 | 21.5 | -27.2 | NP_943800 | 5' arm 3' arm | ||
23505 | - | 60082 | 89 | 24 | -27.2 | NP_943852 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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