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GenBank Identifier | RefSeq Acc. | Name |
38638403 | NC_005259.1 | Mycobacteriophage PG1 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
23482 | - | 48366 | 88 | 21 | -23.7 | NP_943834 | 5' arm 3' arm | ||
23293 | + | 47754 | 89 | 20 | -21.2 | NP_943833 | 5' arm 3' arm | ||
23292 | + | 47223 | 90 | 23 | -24.6 | NP_943832 | 5' arm 3' arm | ||
23289 | + | 46543 | 90 | 19.5 | -22.2 | NP_943831 | 5' arm 3' arm | ||
23287 | + | 45675 | 88 | 20 | -24.5 | NP_943831 | 5' arm 3' arm | ||
23291 | + | 46922 | 90 | 20.5 | -23.5 | NP_943831 | 5' arm 3' arm | ||
23290 | + | 46756 | 89 | 21 | -22.6 | NP_943831 | 5' arm 3' arm | ||
23288 | + | 46056 | 89 | 21.5 | -28.6 | NP_943831 | 5' arm 3' arm | ||
23478 | - | 46144 | 89 | 20 | -20.8 | NP_943831 | 5' arm 3' arm | ||
23479 | - | 46758 | 90 | 21 | -23.3 | NP_943831 | 5' arm 3' arm | ||
23481 | - | 47084 | 90 | 19.5 | -26 | NP_943831 | 5' arm 3' arm | ||
23476 | - | 45735 | 90 | 20.5 | -22.3 | NP_943831 | 5' arm 3' arm | ||
23477 | - | 45951 | 89 | 19 | -21.8 | NP_943831 | 5' arm 3' arm | ||
23480 | - | 46942 | 86 | 19.5 | -33.4 | NP_943831 | 5' arm 3' arm | ||
23283 | + | 44063 | 90 | 24 | -23.5 | NP_943830 | 5' arm 3' arm | ||
23284 | + | 44190 | 90 | 19 | -23.5 | NP_943830 | 5' arm 3' arm | ||
23475 | - | 44750 | 89 | 19 | -31 | NP_943830 | 5' arm 3' arm | ||
23285 | + | 44285 | 87 | 22 | -24.3 | NP_943830 | 5' arm 3' arm | ||
23286 | + | 44599 | 88 | 20.5 | -25.2 | NP_943830 | 5' arm 3' arm | ||
23474 | - | 44415 | 84 | 21 | -24.1 | NP_943830 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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