miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22191	-	74069	88	19	-22.5	NP_861689		5' arm      3' arm
22156	-	53844	89	19	-22.8	NP_861662		5' arm      3' arm
22137	-	32751	90	20.5	-22.5	NP_861642		5' arm      3' arm
22141	-	36367	90	20.5	-24.6	NP_861646		5' arm      3' arm
22158	-	54222	86	21	-26.4	NP_861662		5' arm      3' arm
22178	-	64326	89	23	-29.6	NP_861675		5' arm      3' arm
22192	-	74256	90	19.5	-23.2	NP_861689		5' arm      3' arm
22193	-	75437	90	19.5	-22.8	NP_861690		5' arm      3' arm
22172	-	61594	90	23	-26.6	NP_861672		5' arm      3' arm
22171	-	61345	90	19	-23.7	NP_861672		3' arm
22169	-	59220	86	20.5	-21.6	NP_861668		5' arm      3' arm
22179	-	64441	90	19.5	-21.5	NP_861675		5' arm      3' arm
22185	-	69098	87	21	-27.6	NP_861680		5' arm      3' arm
22149	-	45737	89	19	-19.8	NP_861655		5' arm      3' arm
22152	-	47265	90	20	-22.9	NP_861655		5' arm      3' arm
22155	-	53499	88	21.5	-24.9	NP_861662		5' arm      3' arm
22140	-	35907	89	22.5	-19.7	NP_861645		5' arm      3' arm
22098	-	364	86	19.5	-30.5			5' arm      3' arm
22135	-	32280	89	20.5	-26.7	NP_861642		5' arm      3' arm
22142	-	37356	88	23	-23.2			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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